PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493546.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 367aa    MW: 40345.2 Da    PI: 5.9673
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493546.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH253.5e-08211258455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN ++  L+el+P +    +k    a +L + +++++ Lq
  XP_004493546.1 211 SHSLAERARREKINARMKLLQELVPGC----DKISGTALVLDEIINHVQTLQ 258
                     8*************************9....677888999999999999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.37E-15205276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.52E-8205262No hitNo description
PROSITE profilePS5088814.246207257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-14208275IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.6E-6211258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-7213263IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MEQATVGLHG SIHDGTVLDS VQFDEEIQGI MVPAPAPENA SSFTALLELP PTQAVELLHL  60
PDCDGTASRR LPCCHVGVNQ KPYLPNSSNG NLTLTFPTNA ALIERAAKFS VFAGENSLGE  120
ARLFSVGSGA NLESVKNEPQ ETDSNPCSTQ ECVSDPAVEN KNQRTAKRKE PEKKAKGSAK  180
KSKSVXXXXX GDGEKLPYVH VRVRRGQATD SHSLAERARR EKINARMKLL QELVPGCDKI  240
SGTALVLDEI INHVQTLQRQ VEILSMKLAA VNPRIDFNID RLLAADGSSL MDINLPSMVS  300
PLVWPEIPLN SNRQQYQQHC QFDAFHQPLW GREEDNHNFM TPENSLLSYD SSANSASLHS  360
NQLKMEL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493546.10.0PREDICTED: transcription factor bHLH48
SwissprotQ8VZ021e-96BH048_ARATH; Transcription factor bHLH48
TrEMBLV7CVR70.0V7CVR7_PHAVU; Uncharacterized protein
STRINGGLYMA19G32570.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49852945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.21e-103bHLH family protein